Index _ | A | B | D | E | F | G | H | I | L | M | N | O | P | R | S _ _generate_next_value_() (patch_denoise.bindings.cli.AnalysisEnum static method) (patch_denoise.bindings.cli.DenoiserEnum static method) (patch_denoise.bindings.cli.RecombinationEnum static method) _get_patch_param() (patch_denoise.space_time.base.BaseSpaceTimeDenoiser method) _make_results_file() (patch_denoise.bindings.nipype.PatchDenoise method) _patch_processing() (patch_denoise.space_time.lowrank.HybridPCADenoiser method) (patch_denoise.space_time.lowrank.MPPCADenoiser method) (patch_denoise.space_time.lowrank.RawSVDDenoiser method) _run_interface() (patch_denoise.bindings.nipype.NoiseStdMap method) (patch_denoise.bindings.nipype.PatchDenoise method) A adaptive_thresholding() (in module patch_denoise.denoise) AdaptiveDenoiser (class in patch_denoise.space_time.lowrank) add2patch() (patch_denoise.space_time.base.PatchedArray method) add_frames() (in module patch_denoise.simulation.activations) add_temporal_gaussian_noise() (in module patch_denoise.simulation.noise) add_temporal_rician_noise() (in module patch_denoise.simulation.noise) AnalysisEnum (class in patch_denoise.bindings.cli) B BaseSpaceTimeDenoiser (class in patch_denoise.space_time.base) bids_main() (in module patch_denoise.bindings.cli) D denoise() (patch_denoise.space_time.base.BaseSpaceTimeDenoiser method) (patch_denoise.space_time.lowrank.AdaptiveDenoiser method) (patch_denoise.space_time.lowrank.HybridPCADenoiser method) (patch_denoise.space_time.lowrank.NordicDenoiser method) (patch_denoise.space_time.lowrank.OptimalSVDDenoiser method) (patch_denoise.space_time.lowrank.RawSVDDenoiser method) DenoiserEnum (class in patch_denoise.bindings.cli) E eig_analysis() (in module patch_denoise.space_time.utils) eig_synthesis() (in module patch_denoise.space_time.utils) estimate_noise() (in module patch_denoise.space_time.utils) F fast_cuda_check() (in module patch_denoise.bindings.utils) G g_factor_map() (in module patch_denoise.simulation.phantom) get_patch() (patch_denoise.space_time.base.PatchedArray method) get_patch_locs() (in module patch_denoise.space_time.utils) H hybrid_pca() (in module patch_denoise.denoise) HybridPCADenoiser (class in patch_denoise.space_time.lowrank) I idx2slice() (patch_denoise.space_time.base.PatchedArray method) input_spec (patch_denoise.bindings.nipype.NoiseStdMap attribute) (patch_denoise.bindings.nipype.PatchDenoise attribute) L linear_to_patch_indices() (patch_denoise.space_time.base.PatchedArray class method) load_as_array() (in module patch_denoise.bindings.utils) load_complex_nifti() (in module patch_denoise.bindings.utils) M main() (in module patch_denoise.bindings.cli) marchenko_pastur_median() (in module patch_denoise.space_time.utils) module patch_denoise patch_denoise.bindings patch_denoise.bindings.cli patch_denoise.bindings.nipype patch_denoise.bindings.utils patch_denoise.denoise patch_denoise.simulation patch_denoise.simulation.activations patch_denoise.simulation.noise patch_denoise.simulation.phantom patch_denoise.space_time patch_denoise.space_time.base patch_denoise.space_time.lowrank patch_denoise.space_time.utils mp_pca() (in module patch_denoise.denoise) MPPCADenoiser (class in patch_denoise.space_time.lowrank) mr_ellipsoid_parameters() (in module patch_denoise.simulation.phantom) mr_shepp_logan() (in module patch_denoise.simulation.phantom) mr_shepp_logan_t2_star() (in module patch_denoise.simulation.phantom) N n_patches (patch_denoise.space_time.base.PatchedArray property) NoiseStdMap (class in patch_denoise.bindings.nipype) NoiseStdMapInputSpec (class in patch_denoise.bindings.nipype) NoiseStdMapOutputSpec (class in patch_denoise.bindings.nipype) nordic() (in module patch_denoise.denoise) NordicDenoiser (class in patch_denoise.space_time.lowrank) O optimal_thresholding() (in module patch_denoise.denoise) OptimalSVDDenoiser (class in patch_denoise.space_time.lowrank) output_spec (patch_denoise.bindings.nipype.NoiseStdMap attribute) (patch_denoise.bindings.nipype.PatchDenoise attribute) P parse_dims() (in module patch_denoise.bindings.cli) parse_extra_args() (in module patch_denoise.bindings.cli) parse_mask_arg() (in module patch_denoise.bindings.cli) patch_denoise module patch_denoise.bindings module patch_denoise.bindings.cli module patch_denoise.bindings.nipype module patch_denoise.bindings.utils module patch_denoise.denoise module patch_denoise.simulation module patch_denoise.simulation.activations module patch_denoise.simulation.noise module patch_denoise.simulation.phantom module patch_denoise.space_time module patch_denoise.space_time.base module patch_denoise.space_time.lowrank module patch_denoise.space_time.utils module PatchDenoise (class in patch_denoise.bindings.nipype) PatchDenoiseInputSpec (class in patch_denoise.bindings.nipype) PatchDenoiseOutputSpec (class in patch_denoise.bindings.nipype) PatchedArray (class in patch_denoise.space_time.base) R raw_svt() (in module patch_denoise.denoise) RawSVDDenoiser (class in patch_denoise.space_time.lowrank) RecombinationEnum (class in patch_denoise.bindings.cli) S save_array() (in module patch_denoise.bindings.utils) set_patch() (patch_denoise.space_time.base.PatchedArray method) svd_analysis() (in module patch_denoise.space_time.utils) svd_synthesis() (in module patch_denoise.space_time.utils)