ConfigSNAKE

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ConfigSNAKE#

class snake.toolkit.cli.config.ConfigSNAKE(handlers, sampler, reconstructors, sim_conf=SimConfig(max_sim_time=300, seq=GreConfig(TR=50, TE=30, FA=15), hardware=HardwareConfig(gmax=40, smax=200, n_coils=8, dwell_time_ms=0.001, raster_time_ms=0.005, field=3.0), fov_mm=(192.0, 192.0, 128.0), shape=(192, 192, 128), rng_seed=19290506), engine=EngineConfig(n_jobs=1, chunk_size=1, model='simple', snr=0, nufft_backend='finufft'), phantom=PhantomConfig(name='brainweb', sub_id=4, tissue_select=[], tissue_ignore=[], tissue_file=<TissueFile.tissue_1T5: '/home/runner/work/snake-fmri/snake-fmri/src/snake/core/phantom/data/tissues_properties_1T5.csv'>), stats=StatConfig(roi_tissue_name='ROI', roi_threshold=0.5, event_name='block_on'), cache_dir='${oc.env:PWD}/cache', result_dir='${oc.env:PWD}/results', filename='test.mrd')[source]#

Bases: object

Configuration for SNAKE.

Methods

__init__

Attributes

cache_dir

engine

filename

phantom

result_dir

sim_conf

stats

handlers

sampler

reconstructors

Parameters:
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